Match details
Record ID:
NRN_CS444252
Database:
nrnl1
Go to original record
Description:
Sequence 1 from Patent WO2006108675. Elite event A5547-127 and methods and kits for identifying such event in biological samples. Sequence 1 from patent US 8017756.
Taxon:
unidentified
Original size:
810 bp
Patents:
WO2006108675 (lens , espacenet )
JP2008535509 (lens , espacenet )
US8017756 (lens , espacenet )
View other 10 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
267
341
+
75 bp
1 gctatttggt ggcatttttc caaaaacccg caatgtcata ccgtcatcgt
51 tgtcagaagt aagttggccg cagtg
View other 10 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
22 bp
0
0
1
22
3.23e-10
primerB
100.0
21 bp
0
0
75
55
1.09e-09
probe
100.0
26 bp
0
0
28
53
2.38e-12
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.