Match details
Record ID:
NRN_CS126614
Database:
nrnl1
Go to original record
Description:
Sequence 1 from Patent WO2005061720. Sequence 1 from patent US 7157281. High Lysine Maize Compositions and Methods for Detection Thereof. High Lysine Maize Compositions and Methods for Detection Thereof. Sequence 1 from patent US 7615621. Sequence 1 from patent US 8236938.
Taxon:
unidentified
Original size:
1961 bp
Patents:
WO2005061720 (lens , espacenet )
US7157281 (lens , espacenet )
US2005132437 (lens , espacenet )
JP2007513629 (lens , espacenet )
US7615621 (lens , espacenet )
US2007028322 (lens , espacenet )
US8236938 (lens , espacenet )
View other 8 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
1707
1817
+
111 bp
1 tgggttcagt ctgcgaatgt ttgggggtgg gggccaatcc ctgcgcagaa
51 tctcaggatc cgagcggagt ttatgggtcg acggtatcga taagcttgat
101 atcgaattcc t
View other 8 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
21 bp
0
0
1
21
1.65e-09
primerB
100.0
25 bp
0
0
111
87
1.24e-11
probe
100.0
24 bp
0
0
61
84
4.22e-11
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.