Match details
View other 5 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
155
241
+
87 bp
1 ggagtaagac gattcagatc aaacactgat agtttaaact gaaggcggga
51 aacgacaatc tgatcccagc ttgggctgca ggtcgat
View other 5 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
26 bp
0
0
1
26
2.79e-12
primerB
100.0
20 bp
0
0
87
68
4.31e-09
probe
100.0
29 bp
0
0
64
36
6.85e-14
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.