Match details
Record ID: NRN_AR110602
Database:
nrnl1
Go to original record
Description:
Sequence 9 from patent US 6114608. Sequence 9 from patent US 6229075. Sequence 9 from patent US 6232533. Sequence 9 from patent US 6232534. Sequence 9 from patent US 6342660. Sequence 9 from patent US 6399860. Sequence 9 from patent US 6573438.
Taxon:
unidentified
Original size:
7378 bp
Patents:
US6114608 (lens , espacenet )
US6229075 (lens , espacenet )
US6229075 (lens , espacenet )
US6232533 (lens , espacenet )
US6232533 (lens , espacenet )
US6232534 (lens , espacenet )
US6232534 (lens , espacenet )
US6342660 (lens , espacenet )
US6342660 (lens , espacenet )
US6399860 (lens , espacenet )
US6399860 (lens , espacenet )
US6573438 (lens , espacenet )
US6573438 (lens , espacenet )
View other 32 matches for this record
Method: QL-ELE-00-012
Go to GMOMETHODS record
View in JRC GMO-Matrix
Description: Qualitative duplex PCR method for detection of Cauliflower Mosaic Virus 35S promoter and nopaline synthase terminator (partim CaMV P-35S) (Waiblinger et al., 2008).
Target: CaMV P-35S
View other 15625 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
1
0
182
263
+
82 bp
1 gcctctaccg acagtggtcc caaagatgga cccccaccca cgaggaacat
51 cgtggaaaaa gaagacgttc caaccacgtc tt
View other 1467 matches with an identical amplicon
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerB
100.0
22 bp
0
0
82
61
3.55e-10
probe
100.0
22 bp
0
0
21
42
3.55e-10
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
