Match details
| Record ID: |
FV532179.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
CORN PLANT AND SEED CORRESPONDING TO TRANSGENIC EVENT MON89034 AND METHODS FOR DETECTION THEREOF. |
| Taxon: |
unidentified |
| Original size: |
12208 bp |
| Patents: |
JP2009538153 (lens, espacenet)
|
View other 16 matches for this record
View other 7 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
11275 |
11351 |
+ |
77 bp |
|
1 ttctccatat tgaccatcat actcattgca tccccggaaa ttatgttttt
51 ttaaaaacca cggtattata gataccg
View other 7 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
27 bp |
0 |
0 |
1 |
27 |
7.13e-13 |
| primerB |
100.0 |
28 bp |
0 |
0 |
77 |
50 |
2.07e-13 |
| probe |
100.0 |
18 bp |
0 |
0 |
30 |
47 |
4.25e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
