Match details

Record ID:	EA359023.1
Database:	emblrelpat	Go to original record
Description:	Sequence 27 from patent US 7288643.
Taxon:	unidentified
Original size:	3347 bp
Patents:	US7288643 (lens, espacenet)

View other 8 matches for this record

Method:	QT-EVE-ZM-010	Go to GMOMETHODS record
		View in JRC GMO-Matrix
Description:	Quantitative PCR method for detection of maize event TC1507 (Mazzara et al., 2005).
Target:	TC1507

View other 26 matches for this method

Predicted amplification details:

Mismatches	Gaps	From	To	Strand	Amplicon size
0	0	969	1026	+	58 bp

Amplicon:

58 bp

1     tagtcttcgg ccagaatggc ctaactcaag gccctcactc cgcttgatct
51    tggcaaag

View other 26 matches with an identical amplicon

Primers and probe alignment:

Primer/Probe	% Identity	Length	Mismatches	Gaps	From	To	Score
primerA	100.0	19 bp	0	0	1	19	1.02e-08
primerB	100.0	18 bp	0	0	58	41	3.43e-08
probe	100.0	21 bp	0	0	22	42	8.95e-10

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.