Match details
| Record ID: |
AR606321.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
Sequence 1 from patent US 6818807. |
| Taxon: |
unidentified |
| Original size: |
850 bp |
| Patents: |
US6818807 (lens, espacenet)
|
View other 6 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
653 |
730 |
+ |
78 bp |
|
1 caaggaacta ttcaactgag cttaacagta ctcggccgtc gaccgcggta
51 cccggaattc caatcccaca aaaatctg
View other 4 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
3.84e-09 |
| primerB |
100.0 |
24 bp |
0 |
0 |
78 |
55 |
2.91e-11 |
| probe |
100.0 |
26 bp |
0 |
0 |
21 |
46 |
2.48e-12 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
