Match details

Record ID:	AR225313.1
Database:	emblrelpat	Go to original record
Description:	Sequence 5 from patent US 6441277.
Taxon:	unidentified
Original size:	10846 bp
Patents:	US6441277 (lens, espacenet)

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Method:	QL-ELE-00-019	Go to GMOMETHODS record
		View in JRC GMO-Matrix
Description:	Qualitative PCR method for detection of CP4 epsps gene (Barbau-Piednoir et al., 2014).
Target:	CP4-EPSPS

View other 281 matches for this method

Predicted amplification details:

Mismatches	Gaps	From	To	Strand	Amplicon size
1	0	305	412	+	108 bp

Amplicon:

108 bp

1     gcatgcttca cggtgcaagc agccgtccag caactgctcg taagtcctct
51    ggtctttctg gaaccgtccg tattccaggt gacaagtcta tctcccacag
101   gtccttca

View other 96 matches with an identical amplicon

Primers alignment:

Primer/Probe	% Identity	Length	Mismatches	Gaps	From	To	Score
primerA	100.0	18 bp	0	0	1	18	6.07e-08

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.