Match details
| Record ID: |
HC043988.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
Sequence 1 from Patent EP2112224. |
| Taxon: |
synthetic construct |
| Original size: |
291 bp |
| Patents: |
EP2112224 (lens, espacenet)
|
View other 18 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
76 |
159 |
- |
84 bp |
|
1 ttcattcaaa ataagatcat acatacaggt taaaataaac atagggaacc
51 caaatggaaa aggaaggtgg ctcctacaaa tgcc
View other 17 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
31 bp |
0 |
0 |
1 |
31 |
5.53e-15 |
| primerB |
100.0 |
21 bp |
0 |
0 |
84 |
64 |
1.23e-09 |
| probe |
100.0 |
15 bp |
0 |
0 |
63 |
49 |
1.86e-06 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
