Match details
| Record ID: |
HB386790.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
Sequence 3 from Patent WO2009064652. |
| Taxon: |
synthetic construct |
| Original size: |
6285 bp |
| Patents: |
WO2009064652 (lens, espacenet)
|
View other 11 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
5707 |
5795 |
+ |
89 bp |
|
1 tggtgatatg aagatacatg cttagcatgc cccaggcacg cttagtgtgt
51 gtgtcaaaca ctgatagttt aaactgaagg cgggaaacg
View other 11 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
28 bp |
0 |
0 |
1 |
28 |
2.42e-13 |
| primerB |
100.0 |
22 bp |
0 |
0 |
89 |
68 |
3.87e-10 |
| probe |
100.0 |
30 bp |
0 |
0 |
64 |
35 |
2.03e-14 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
