Match details
Record ID: |
DJ058152.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
Corn Plant MON88017 and Compositions and Methods for Detection Thereof. |
Taxon: |
synthetic construct |
Original size: |
7450 bp |
Patents: |
JP2007513641 (lens, espacenet)
|
View other 17 matches for this record
View other 15527 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
3473 |
3652 |
+ |
180 bp |
|
1 gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51 acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101 tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151 aaacaaaata tagcgcgcaa actaggataa
View other 29619 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
8.54e-09 |
primerB |
100.0 |
20 bp |
0 |
0 |
180 |
161 |
8.54e-09 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.