Match details
| Record ID: |
DJ056834.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
High Lysine Maize Compositions and Methods for Detection Thereof. |
| Taxon: |
synthetic construct |
| Original size: |
1961 bp |
| Patents: |
JP2007513629 (lens, espacenet)
|
View other 8 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
1707 |
1817 |
+ |
111 bp |
|
1 tgggttcagt ctgcgaatgt ttgggggtgg gggccaatcc ctgcgcagaa
51 tctcaggatc cgagcggagt ttatgggtcg acggtatcga taagcttgat
101 atcgaattcc t
View other 8 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
21 bp |
0 |
0 |
1 |
21 |
1.65e-09 |
| primerB |
100.0 |
25 bp |
0 |
0 |
111 |
87 |
1.24e-11 |
| probe |
100.0 |
24 bp |
0 |
0 |
61 |
84 |
4.22e-11 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
