Match details
Record ID: |
DI241796.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
KR 1020120081150-A/6: SOYBEAN TRANSGENIC EVENT MON 87708 AND METHODS OF USE THEREOF. |
Taxon: |
artificial sequences |
Original size: |
5946 bp |
Patents: |
KR1020120081150 (lens, espacenet)
|
View other 1 match for this record
View other 13 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
4094 |
4184 |
+ |
91 bp |
|
1 tcatactcat tgctgatcca tgtagatttc ccggacttta gctcaaaatg
51 catgtattta ttagcgttct gtcttttcgt taatttgttc t
View other 13 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
25 bp |
0 |
0 |
1 |
25 |
1.00e-11 |
primerB |
100.0 |
27 bp |
0 |
0 |
91 |
65 |
8.52e-13 |
probe |
100.0 |
28 bp |
0 |
0 |
29 |
56 |
2.48e-13 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.