Match details
| Record ID: |
JD011421.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
Sequence 1 from Patent WO2014170387. |
| Taxon: |
synthetic construct |
| Original size: |
415 bp |
| Patents: |
WO2014170387 (lens, espacenet)
|
View other 13 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
152 |
275 |
- |
124 bp |
|
1 caagatggga attaacatct acaaattgcc ttttcttatc ggccatgtac
51 atcctaccat aattataatt ataattatat aatacttgaa accatggtgc
101 cccctgctgc tttacatgga tttc
View other 6 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
28 bp |
0 |
0 |
1 |
28 |
3.25e-13 |
| primerB |
100.0 |
23 bp |
0 |
0 |
124 |
102 |
1.51e-10 |
| probe |
95.0 |
20 bp |
1 |
0 |
40 |
59 |
2.91e-07 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
