Match details
| Record ID: |
HZ777416.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
JP 2015083004-A/6: SOYBEAN PLANT AND SEED CORRESPONDING TO TRANSGENIC EVENT MON87769 AND METHODS FOR DETECTION THEREOF. |
| Taxon: |
synthetic construct |
| Original size: |
9294 bp |
| Patents: |
JP2015083004 (lens, espacenet)
|
View other 1 match for this record
View other 6 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
8301 |
8387 |
+ |
87 bp |
|
1 catactcatt gctgatccat gtagatttcc cggacatgaa gccatttaca
51 attgaccatc atactcaaaa cttcacgagc aacttgc
View other 6 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
27 bp |
0 |
0 |
1 |
27 |
8.12e-13 |
| primerB |
100.0 |
22 bp |
0 |
0 |
87 |
66 |
3.78e-10 |
| probe |
100.0 |
28 bp |
0 |
0 |
29 |
56 |
2.36e-13 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
