Match details
| Record ID: |
MI638669.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
Sequence 1 from patent US 9961848. |
| Taxon: |
unidentified |
| Original size: |
10656 bp |
| Patents: |
US9961848 (lens, espacenet)
|
View other 5 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
6030 |
6117 |
+ |
88 bp |
|
1 aacagaagtt tccgttgagc tttaagacgt ttggggaagc tgtcccatgc
51 ccatcaaaga agacagtaca cgatccgagc tacgaatg
View other 5 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
28 bp |
0 |
0 |
1 |
28 |
2.39e-13 |
| primerB |
100.0 |
23 bp |
0 |
0 |
88 |
66 |
1.13e-10 |
| probe |
100.0 |
23 bp |
0 |
0 |
30 |
52 |
1.13e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
