Match details
Record ID: |
MI040520.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
Sequence 3 from patent US 9738903. |
Taxon: |
unidentified |
Original size: |
956 bp |
Patents: |
US9738903 (lens, espacenet)
|
View other 11 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
735 |
835 |
+ |
101 bp |
|
1 tccttgaacc ttattttata gtgcacaaaa ccttttagtc atcatgttgt
51 accacttcaa acactgatag tttaaactga aggcgggaaa cgacaatctg
101 a
View other 11 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
27 bp |
0 |
0 |
1 |
27 |
9.51e-13 |
primerB |
100.0 |
24 bp |
0 |
0 |
101 |
78 |
3.82e-11 |
probe |
100.0 |
30 bp |
0 |
0 |
36 |
65 |
2.21e-14 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.