Match details

Record ID:	KH197631.1
Database:	emblrelpat	Go to original record
Description:	Sequence 6 from patent US 9447428.
Taxon:	unidentified
Original size:	5946 bp
Patents:	US9447428 (lens, espacenet)

View other 1 match for this record

Method:	QT-EVE-GM-012	Go to GMOMETHODS record
		View in JRC GMO-Matrix
Description:	Quantitative PCR method for detection of soybean event MON87708 (Savini et al., 2013).
Target:	MON87708

View other 13 matches for this method

Predicted amplification details:

Mismatches	Gaps	From	To	Strand	Amplicon size
0	0	4094	4184	+	91 bp

Amplicon:

91 bp

1     tcatactcat tgctgatcca tgtagatttc ccggacttta gctcaaaatg
51    catgtattta ttagcgttct gtcttttcgt taatttgttc t

View other 13 matches with an identical amplicon

Primers and probe alignment:

Primer/Probe	% Identity	Length	Mismatches	Gaps	From	To	Score
primerA	100.0	25 bp	0	0	1	25	1.00e-11
primerB	100.0	27 bp	0	0	91	65	8.52e-13
probe	100.0	28 bp	0	0	29	56	2.48e-13

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.