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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 18 amplicons

Restrict to taxon(s):


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI357128.1 emblrelpat KR 1020130020849-A/49: Corn event M... 10579 bp synthetic construct QT-EVE-ZM-022 92 bp View
DI357138.1 emblrelpat KR 1020130020849-A/59: Corn event M... 1518 bp synthetic construct QT-EVE-ZM-022 92 bp View
DI357223.1 emblrelpat KR 1020130019014-A/49: Corn event M... 10579 bp synthetic construct QT-EVE-ZM-022 92 bp View
DI357233.1 emblrelpat KR 1020130019014-A/59: Corn event M... 1518 bp synthetic construct QT-EVE-ZM-022 92 bp View
GZ452829.1 emblrelpat Sequence 49 from patent US 8232456. 10579 bp unidentified QT-EVE-ZM-022 92 bp View
GZ452839.1 emblrelpat Sequence 59 from patent US 8232456. 1518 bp unidentified QT-EVE-ZM-022 92 bp View
HI203339.1 emblrelpat Sequence 49 from Patent EP2032700. 10579 bp synthetic construct QT-EVE-ZM-022 92 bp View
HI203349.1 emblrelpat Sequence 59 from Patent EP2032700. 1518 bp synthetic construct QT-EVE-ZM-022 92 bp View
HJ191996.1 emblrelpat Sequence 49 from patent US 8455720. 10579 bp unidentified QT-EVE-ZM-022 92 bp View
HJ192006.1 emblrelpat Sequence 59 from patent US 8455720. 1518 bp unidentified QT-EVE-ZM-022 92 bp View
HJ698634.1 emblrelpat Sequence 49 from patent US 8618272. 10579 bp unidentified QT-EVE-ZM-022 92 bp View
HJ698644.1 emblrelpat Sequence 59 from patent US 8618272. 1518 bp unidentified QT-EVE-ZM-022 92 bp View
JA816799.1 emblrelpat Sequence 49 from Patent EP2468902. 10579 bp synthetic construct QT-EVE-ZM-022 92 bp View
JA816809.1 emblrelpat Sequence 59 from Patent EP2468902. 1518 bp synthetic construct QT-EVE-ZM-022 92 bp View
MI064608.1 emblrelpat Sequence 49 from patent US 9752198. 10579 bp unidentified QT-EVE-ZM-022 92 bp View
MI064618.1 emblrelpat Sequence 59 from patent US 9752198. 1518 bp unidentified QT-EVE-ZM-022 92 bp View
NRN_GZ452829 nrnl1 Sequence 49 from patent US 8232456.... 10579 bp unidentified QT-EVE-ZM-022 92 bp View
NRN_GZ452839 nrnl1 Sequence 59 from patent US 8232456.... 1518 bp unidentified QT-EVE-ZM-022 92 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.