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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 19 amplicons

Restrict to taxon(s):


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI240980.1 emblrelpat KR 1020120089848-A/29: AAD-1 EVENT ... 8557 bp artificial sequences QT-EVE-ZM-004 98 bp View
DI240985.1 emblrelpat KR 1020120053038-A/1: DETECTION OF ... 8557 bp artificial sequences QT-EVE-ZM-004 98 bp View
DI392474.1 emblrelpat KR 1020140026385-A/29: METHODS OF W... 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
HJ579536.1 emblrelpat Sequence 29 from patent US 8598413. 8557 bp unidentified QT-EVE-ZM-004 98 bp View
HJ998961.1 emblrelpat Sequence 4 from patent US 8748700. 8557 bp unidentified QT-EVE-ZM-004 98 bp View
HL351136.1 emblrelpat Sequence 1 from patent US 9204599. 8557 bp unidentified QT-EVE-ZM-004 98 bp View
HL940488.1 emblrelpat Sequence 29 from patent US 9402358. 8557 bp unidentified QT-EVE-ZM-004 98 bp View
HW122033.1 emblrelpat JP 2013505706-A/1: DETECTION OF AAD... 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
HW289965.1 emblrelpat JP 2013526832-A/29: AAD-1 Event DAS... 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
HW608006.1 emblrelpat JP 2014514251-A/29: METHODS OF WEED... 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
JA795183.1 emblrelpat Sequence 1 from Patent EP2467500. 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
JA818067.1 emblrelpat Sequence 29 from Patent EP2467010. 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
JC265312.1 emblrelpat Sequence 4 from Patent EP2467488. 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
JC278035.1 emblrelpat Sequence 29 from Patent EP2677859. 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
LF644865.1 emblrelpat JP 2016136941-A/29: AAD-1 Event DAS... 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
LZ219019.1 emblrelpat JP 2017169563-A/29: AAD-1 Event DAS... 8557 bp synthetic construct QT-EVE-ZM-004 98 bp View
MO155254.1 emblrelpat Sequence 29 from patent US 10323287. 8557 bp unidentified QT-EVE-ZM-004 98 bp View
MY406861.1 emblrelpat Sequence 29 from patent US 11098322. 8557 bp unidentified QT-EVE-ZM-004 98 bp View
NRN_JA795183 nrnl1 Sequence 1 from Patent EP2467500. ... 8557 bp unidentified QT-EVE-ZM-004 98 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.