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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GZ510878 nrnl1 Sequence 33 from patent US 8269068. 11205 bp unidentified QT-ELE-00-002 68 bp View
NRN_GZ510878 nrnl1 Sequence 33 from patent US 8269068. 11205 bp unidentified QT-ELE-00-002 68 bp View
NRN_GZ510881 nrnl1 Sequence 36 from patent US 8269068. 11205 bp unidentified QT-ELE-00-002 68 bp View
NRN_GZ510881 nrnl1 Sequence 36 from patent US 8269068. 11205 bp unidentified QT-ELE-00-002 68 bp View
NRN_HC921502 nrnl1 Sequence 4 from Patent EP2199399. ... 4470 bp unidentified QT-ELE-00-002 68 bp View
NRN_HC921506 nrnl1 Sequence 8 from Patent EP2199399. ... 4476 bp unidentified QT-ELE-00-002 68 bp View
NRN_HC921509 nrnl1 Sequence 11 from Patent EP2199399. ... 4411 bp unidentified QT-ELE-00-002 68 bp View
NRN_HC921512 nrnl1 Sequence 14 from Patent EP2199399. ... 4471 bp unidentified QT-ELE-00-002 68 bp View
NRN_HD115805 nrnl1 Sequence 25 from Patent WO2010079032. 7878 bp unidentified QT-ELE-00-002 68 bp View
NRN_HD115809 nrnl1 Sequence 29 from Patent WO2010079032. 4903 bp unidentified QT-ELE-00-002 68 bp View
NRN_HV774099 nrnl1 JP 2012511926-A/55: TARGETED INTEGR... 2349 bp unidentified QT-ELE-00-002 68 bp View
NRN_JA216561 nrnl1 Sequence 38 from Patent EP2309843. ... 15162 bp unidentified QT-ELE-00-002 68 bp View
OF002214.1 emblrelpat KR 1020200047746-A/88: METHODS AND ... 6661 bp synthetic construct QT-ELE-00-002 68 bp View
OF002333.1 emblrelpat KR 1020200047746-A/289: METHODS AND... 6661 bp synthetic construct QT-ELE-00-002 68 bp View
OF002347.1 emblrelpat KR 1020200047746-A/303: METHODS AND... 11938 bp synthetic construct QT-ELE-00-002 68 bp View
OF002358.1 emblrelpat KR 1020200047746-A/314: METHODS AND... 3336 bp synthetic construct QT-ELE-00-002 68 bp View
OF066589.1 emblrelpat KR 1020200093076-A/9: MAIZE EVENT M... 14008 bp synthetic construct QT-ELE-00-002 68 bp View
OF066590.1 emblrelpat KR 1020200093076-A/10: MAIZE EVENT ... 16068 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.