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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CS584024 nrnl1 Sequence 11 from Patent WO200703149... 7838 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS598021 nrnl1 Sequence 6 from Patent WO2007038345... 12283 bp unidentified QT-ELE-00-002 68 bp View
NRN_DD406932 nrnl1 Plant production of immunoglobulins... 5118 bp unidentified QT-ELE-00-002 68 bp View
NRN_DD406933 nrnl1 Plant production of immunoglobulins... 13680 bp unidentified QT-ELE-00-002 68 bp View
NRN_DM036186 nrnl1 Anti-T Cell and Autoantigen Treatme... 11674 bp unidentified QT-ELE-00-002 68 bp View
NRN_DM036188 nrnl1 Anti-T Cell and Autoantigen Treatme... 13025 bp unidentified QT-ELE-00-002 68 bp View
NRN_DM036191 nrnl1 Anti-T Cell and Autoantigen Treatme... 10510 bp unidentified QT-ELE-00-002 68 bp View
NRN_DM139743 nrnl1 SAFFLOWER WITH ELEVATED GAMMA-LINOL... 7803 bp unidentified QT-ELE-00-002 68 bp View
NRN_DM139744 nrnl1 SAFFLOWER WITH ELEVATED GAMMA-LINOL... 5003 bp unidentified QT-ELE-00-002 68 bp View
NRN_DM139745 nrnl1 SAFFLOWER WITH ELEVATED GAMMA-LINOL... 5013 bp unidentified QT-ELE-00-002 68 bp View
NRN_DM378888 nrnl1 Gene tolerant to phosphinothricin t... 562 bp unidentified QT-ELE-00-002 68 bp View
NRN_EA021058 nrnl1 Sequence 12 from patent US 7132291.... 4767 bp unidentified QT-ELE-00-002 68 bp View
NRN_EA021065 nrnl1 Sequence 24 from patent US 7132291.... 10575 bp unidentified QT-ELE-00-002 68 bp View
NRN_EA021066 nrnl1 Sequence 25 from patent US 7132291.... 10677 bp unidentified QT-ELE-00-002 68 bp View
NRN_EA021067 nrnl1 Sequence 26 from patent US 7132291.... 10603 bp unidentified QT-ELE-00-002 68 bp View
NRN_FZ421805 nrnl1 JP 2010539989-A/1: METHODS FOR TRAN... 8448 bp unidentified QT-ELE-00-002 68 bp View
NRN_FZ421806 nrnl1 JP 2010539989-A/2: METHODS FOR TRAN... 8448 bp unidentified QT-ELE-00-002 68 bp View
NRN_GM040760 nrnl1 Sequence 8 from Patent WO2008058946. 5027 bp unidentified QT-ELE-00-002 68 bp View
NRN_GM040761 nrnl1 Sequence 9 from Patent WO2008058946. 4157 bp unidentified QT-ELE-00-002 68 bp View
NRN_GY007493 nrnl1 Sequence 3 from patent US 7883850. 10348 bp unidentified QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.