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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_BD014472 nrnl1 Transgenic corn and method of detec... 892 bp unidentified QT-ELE-00-002 68 bp View
NRN_BD014476 nrnl1 Transgenic corn and method of detec... 601 bp unidentified QT-ELE-00-002 68 bp View
NRN_BD014493 nrnl1 Transgenic corn and method of detec... 820 bp unidentified QT-ELE-00-002 68 bp View
NRN_BD194459 nrnl1 Chimeric insecticidal protein and g... 5465 bp unidentified QT-ELE-00-002 68 bp View
NRN_CQ769036 nrnl1 Sequence 14 from Patent WO2004007733. 10817 bp unidentified QT-ELE-00-002 68 bp View
NRN_CQ769037 nrnl1 Sequence 15 from Patent WO2004007733. 10986 bp unidentified QT-ELE-00-002 68 bp View
NRN_CQ924483 nrnl1 Sequence 10 from Patent EP1477557. ... 13737 bp unidentified QT-ELE-00-002 68 bp View
NRN_CQ945862 nrnl1 Sequence 24 from Patent WO200409944... 11361 bp unidentified QT-ELE-00-002 68 bp View
NRN_CQ945863 nrnl1 Sequence 25 from Patent WO200409944... 6186 bp unidentified QT-ELE-00-002 68 bp View
NRN_CQ945865 nrnl1 Sequence 27 from Patent WO200409944... 3347 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS007935 nrnl1 Sequence 2 from Patent EP1502955. ... 11195 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS007936 nrnl1 Sequence 3 from Patent EP1502955. ... 12415 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS047645 nrnl1 Sequence 3 from Patent WO2005019459... 11533 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS195873 nrnl1 Sequence 1 from Patent WO2005103266... 15490 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS195874 nrnl1 Sequence 2 from Patent WO2005103266... 9382 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS559097 nrnl1 Sequence 12 from Patent WO2006032426. 10765 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS566035 nrnl1 Sequence 22 from Patent WO200603937... 2987 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS566036 nrnl1 Sequence 23 from Patent WO200603937... 11922 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS566037 nrnl1 Sequence 24 from Patent WO200603937... 7390 bp unidentified QT-ELE-00-002 68 bp View
NRN_CS566040 nrnl1 Sequence 27 from Patent WO200603937... 2830 bp unidentified QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.