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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_A10512 nrnl1 Artificial sequence for PTC resistence 507 bp unidentified QT-ELE-00-002 68 bp View
NRN_A17371 nrnl1 Artificial sequence for N-acetyltra... 564 bp unidentified QT-ELE-00-002 68 bp View
NRN_A17375 nrnl1 Nucleotide sequence 6 from patent n... 564 bp unidentified QT-ELE-00-002 68 bp View
NRN_A29189 nrnl1 Acetyltranferase DNA with SalI link... 559 bp unidentified QT-ELE-00-002 68 bp View
NRN_A29190 nrnl1 Acetyltranferase DNA with SalI link... 558 bp unidentified QT-ELE-00-002 68 bp View
NRN_A29202 nrnl1 Synthetic DNA for phosphinothricin ... 559 bp unidentified QT-ELE-00-002 68 bp View
NRN_A31679 nrnl1 DNA sequence from patent DE4013099 564 bp unidentified QT-ELE-00-002 68 bp View
NRN_A31680 nrnl1 DNA sequence from patent DE4013099 564 bp unidentified QT-ELE-00-002 68 bp View
NRN_A95052 nrnl1 Sequence 9 from Patent WO9929880. ... 4186 bp unidentified QT-ELE-00-002 68 bp View
NRN_A99126 nrnl1 Sequence 1 from Patent EP0899340. 1117 bp unidentified QT-ELE-00-002 113 bp View
NRN_AR110600 nrnl1 Sequence 7 from patent US 6114608. ... 568 bp unidentified QT-ELE-00-002 68 bp View
NRN_AR110602 nrnl1 Sequence 9 from patent US 6114608. ... 7378 bp unidentified QT-ELE-00-002 68 bp View
NRN_AX195438 nrnl1 Sequence 1 from Patent WO0151654. ... 3983 bp unidentified QT-ELE-00-002 68 bp View
NRN_AX683002 nrnl1 Sequence 5 from Patent WO03006660. ... 552 bp unidentified QT-ELE-00-002 68 bp View
NRN_AX683021 nrnl1 Sequence 24 from Patent WO03006660.... 8327 bp unidentified QT-ELE-00-002 68 bp View
NRN_AX683022 nrnl1 Sequence 25 from Patent WO03006660.... 8441 bp unidentified QT-ELE-00-002 68 bp View
NRN_AX696001 nrnl1 Sequence 13 from Patent WO03008596. 6080 bp unidentified QT-ELE-00-002 68 bp View
NRN_AX696003 nrnl1 Sequence 15 from Patent WO03008596. 8384 bp unidentified QT-ELE-00-002 68 bp View
NRN_AX840288 nrnl1 Sequence 10 from Patent WO03078614.... 7545 bp unidentified QT-ELE-00-002 68 bp View
NRN_AX840289 nrnl1 Sequence 11 from Patent WO03078614.... 11643 bp unidentified QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.