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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MY148515.1 emblrelpat Sequence 24 from patent US 11046968. 36553 bp unidentified QT-ELE-00-002 68 bp View
MY148516.1 emblrelpat Sequence 25 from patent US 11046968. 36658 bp unidentified QT-ELE-00-002 68 bp View
MY148517.1 emblrelpat Sequence 26 from patent US 11046968. 36494 bp unidentified QT-ELE-00-002 68 bp View
MY148518.1 emblrelpat Sequence 27 from patent US 11046968. 37334 bp unidentified QT-ELE-00-002 68 bp View
MY148519.1 emblrelpat Sequence 28 from patent US 11046968. 37330 bp unidentified QT-ELE-00-002 68 bp View
MY148520.1 emblrelpat Sequence 29 from patent US 11046968. 38465 bp unidentified QT-ELE-00-002 68 bp View
MY148521.1 emblrelpat Sequence 30 from patent US 11046968. 36595 bp unidentified QT-ELE-00-002 68 bp View
MY148522.1 emblrelpat Sequence 31 from patent US 11046968. 36880 bp unidentified QT-ELE-00-002 68 bp View
MY148523.1 emblrelpat Sequence 32 from patent US 11046968. 37478 bp unidentified QT-ELE-00-002 68 bp View
MY148524.1 emblrelpat Sequence 33 from patent US 11046968. 35035 bp unidentified QT-ELE-00-002 68 bp View
MY148525.1 emblrelpat Sequence 34 from patent US 11046968. 33995 bp unidentified QT-ELE-00-002 68 bp View
MY148526.1 emblrelpat Sequence 35 from patent US 11046968. 38249 bp unidentified QT-ELE-00-002 68 bp View
MY148527.1 emblrelpat Sequence 36 from patent US 11046968. 36011 bp unidentified QT-ELE-00-002 68 bp View
MY148528.1 emblrelpat Sequence 37 from patent US 11046968. 38299 bp unidentified QT-ELE-00-002 68 bp View
MY148529.1 emblrelpat Sequence 38 from patent US 11046968. 36021 bp unidentified QT-ELE-00-002 68 bp View
MY406819.1 emblrelpat Sequence 9 from patent US 11098321. 6762 bp unidentified QT-ELE-00-002 68 bp View
MY406820.1 emblrelpat Sequence 10 from patent US 11098321. 9259 bp unidentified QT-ELE-00-002 68 bp View
NRN_A02774 nrnl1 Artificial phosphinothricin resista... 558 bp unidentified QT-ELE-00-002 68 bp View
NRN_A02776 nrnl1 Artificial sequence phosphinothrici... 558 bp unidentified QT-ELE-00-002 68 bp View
NRN_A10510 nrnl1 Artificial sequence for PTC resistance 507 bp unidentified QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.