European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MX926813.1 emblrelpat Sequence 46 from patent US 11053511. 41726 bp unidentified QT-ELE-00-002 68 bp View
MX926814.1 emblrelpat Sequence 47 from patent US 11053511. 36797 bp unidentified QT-ELE-00-002 68 bp View
MX926815.1 emblrelpat Sequence 48 from patent US 11053511. 42674 bp unidentified QT-ELE-00-002 68 bp View
MX926816.1 emblrelpat Sequence 49 from patent US 11053511. 40406 bp unidentified QT-ELE-00-002 68 bp View
MX926817.1 emblrelpat Sequence 50 from patent US 11053511. 39630 bp unidentified QT-ELE-00-002 68 bp View
MX926818.1 emblrelpat Sequence 51 from patent US 11053511. 36936 bp unidentified QT-ELE-00-002 68 bp View
MX926819.1 emblrelpat Sequence 52 from patent US 11053511. 36767 bp unidentified QT-ELE-00-002 68 bp View
MX926820.1 emblrelpat Sequence 53 from patent US 11053511. 35494 bp unidentified QT-ELE-00-002 68 bp View
MX926821.1 emblrelpat Sequence 54 from patent US 11053511. 37935 bp unidentified QT-ELE-00-002 68 bp View
MX926822.1 emblrelpat Sequence 55 from patent US 11053511. 38239 bp unidentified QT-ELE-00-002 68 bp View
MX926823.1 emblrelpat Sequence 56 from patent US 11053511. 34850 bp unidentified QT-ELE-00-002 68 bp View
MX926824.1 emblrelpat Sequence 57 from patent US 11053511. 35154 bp unidentified QT-ELE-00-002 68 bp View
MX926825.1 emblrelpat Sequence 58 from patent US 11053511. 38074 bp unidentified QT-ELE-00-002 68 bp View
MX926826.1 emblrelpat Sequence 59 from patent US 11053511. 36718 bp unidentified QT-ELE-00-002 68 bp View
MX926827.1 emblrelpat Sequence 60 from patent US 11053511. 36517 bp unidentified QT-ELE-00-002 68 bp View
MX926828.1 emblrelpat Sequence 61 from patent US 11053511. 36590 bp unidentified QT-ELE-00-002 68 bp View
MX926829.1 emblrelpat Sequence 62 from patent US 11053511. 35499 bp unidentified QT-ELE-00-002 68 bp View
MX926830.1 emblrelpat Sequence 63 from patent US 11053511. 22042 bp unidentified QT-ELE-00-002 68 bp View
MX926831.1 emblrelpat Sequence 64 from patent US 11053511. 23255 bp unidentified QT-ELE-00-002 68 bp View
MX926865.1 emblrelpat Sequence 9 from patent US 11053514. 7914 bp unidentified QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.