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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MX531839.1 emblrelpat Sequence 13 from patent US 10973229. 10256 bp unidentified QT-ELE-00-002 68 bp View
MX531853.1 emblrelpat Sequence 27 from patent US 10973229. 13659 bp unidentified QT-ELE-00-002 68 bp View
MX531854.1 emblrelpat Sequence 28 from patent US 10973229. 14619 bp unidentified QT-ELE-00-002 68 bp View
MX531855.1 emblrelpat Sequence 29 from patent US 10973229. 15294 bp unidentified QT-ELE-00-002 68 bp View
MX926778.1 emblrelpat Sequence 11 from patent US 11053511. 33003 bp unidentified QT-ELE-00-002 68 bp View
MX926798.1 emblrelpat Sequence 31 from patent US 11053511. 38794 bp unidentified QT-ELE-00-002 68 bp View
MX926799.1 emblrelpat Sequence 32 from patent US 11053511. 39711 bp unidentified QT-ELE-00-002 68 bp View
MX926800.1 emblrelpat Sequence 33 from patent US 11053511. 38811 bp unidentified QT-ELE-00-002 68 bp View
MX926801.1 emblrelpat Sequence 34 from patent US 11053511. 35302 bp unidentified QT-ELE-00-002 68 bp View
MX926802.1 emblrelpat Sequence 35 from patent US 11053511. 35154 bp unidentified QT-ELE-00-002 68 bp View
MX926803.1 emblrelpat Sequence 36 from patent US 11053511. 36102 bp unidentified QT-ELE-00-002 68 bp View
MX926804.1 emblrelpat Sequence 37 from patent US 11053511. 39183 bp unidentified QT-ELE-00-002 68 bp View
MX926805.1 emblrelpat Sequence 38 from patent US 11053511. 38742 bp unidentified QT-ELE-00-002 68 bp View
MX926806.1 emblrelpat Sequence 39 from patent US 11053511. 38760 bp unidentified QT-ELE-00-002 68 bp View
MX926807.1 emblrelpat Sequence 40 from patent US 11053511. 34862 bp unidentified QT-ELE-00-002 68 bp View
MX926808.1 emblrelpat Sequence 41 from patent US 11053511. 34404 bp unidentified QT-ELE-00-002 68 bp View
MX926809.1 emblrelpat Sequence 42 from patent US 11053511. 38762 bp unidentified QT-ELE-00-002 68 bp View
MX926810.1 emblrelpat Sequence 43 from patent US 11053511. 35836 bp unidentified QT-ELE-00-002 68 bp View
MX926811.1 emblrelpat Sequence 44 from patent US 11053511. 47165 bp unidentified QT-ELE-00-002 68 bp View
MX926812.1 emblrelpat Sequence 45 from patent US 11053511. 46978 bp unidentified QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.