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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MV315557.1 emblrelpat Sequence 59 from patent US 10669554. 35494 bp unidentified QT-ELE-00-002 68 bp View
MV315558.1 emblrelpat Sequence 60 from patent US 10669554. 37935 bp unidentified QT-ELE-00-002 68 bp View
MV315559.1 emblrelpat Sequence 61 from patent US 10669554. 38239 bp unidentified QT-ELE-00-002 68 bp View
MV315560.1 emblrelpat Sequence 62 from patent US 10669554. 34850 bp unidentified QT-ELE-00-002 68 bp View
MV315561.1 emblrelpat Sequence 63 from patent US 10669554. 35154 bp unidentified QT-ELE-00-002 68 bp View
MV315562.1 emblrelpat Sequence 64 from patent US 10669554. 38074 bp unidentified QT-ELE-00-002 68 bp View
MV315563.1 emblrelpat Sequence 65 from patent US 10669554. 36718 bp unidentified QT-ELE-00-002 68 bp View
MV315564.1 emblrelpat Sequence 66 from patent US 10669554. 36517 bp unidentified QT-ELE-00-002 68 bp View
MV315565.1 emblrelpat Sequence 67 from patent US 10669554. 36590 bp unidentified QT-ELE-00-002 68 bp View
MV315566.1 emblrelpat Sequence 68 from patent US 10669554. 35499 bp unidentified QT-ELE-00-002 68 bp View
MV315567.1 emblrelpat Sequence 69 from patent US 10669554. 22042 bp unidentified QT-ELE-00-002 68 bp View
MV315568.1 emblrelpat Sequence 70 from patent US 10669554. 23255 bp unidentified QT-ELE-00-002 68 bp View
MV348901.1 emblrelpat Sequence 1 from patent US 10689664. 8295 bp unidentified QT-ELE-00-002 68 bp View
MV348902.1 emblrelpat Sequence 2 from patent US 10689664. 13821 bp unidentified QT-ELE-00-002 68 bp View
MV720506.1 emblrelpat Sequence 2 from patent US 10781455. 8029 bp unidentified QT-ELE-00-002 68 bp View
MV983550.1 emblrelpat Sequence 1 from patent US 10844396. 8676 bp unidentified QT-ELE-00-002 68 bp View
MV983551.1 emblrelpat Sequence 2 from patent US 10844396. 14262 bp unidentified QT-ELE-00-002 68 bp View
MX377764.1 emblrelpat Sequence 9 from patent US 10920239. 14008 bp unidentified QT-ELE-00-002 68 bp View
MX377765.1 emblrelpat Sequence 10 from patent US 10920239. 16068 bp unidentified QT-ELE-00-002 68 bp View
MX500620.1 emblrelpat Sequence 7 from patent US 10954528. 552 bp unidentified QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.