European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
AR152424.1 emblrelpat Sequence 9 from patent US 6232533. 7378 bp unidentified QT-ELE-00-002 68 bp View
AR152431.1 emblrelpat Sequence 7 from patent US 6232534. 568 bp unidentified QT-ELE-00-002 68 bp View
AR152433.1 emblrelpat Sequence 9 from patent US 6232534. 7378 bp unidentified QT-ELE-00-002 68 bp View
AR184315.1 emblrelpat Sequence 7 from patent US 6342660. 568 bp unidentified QT-ELE-00-002 68 bp View
AR184317.1 emblrelpat Sequence 9 from patent US 6342660. 7378 bp unidentified QT-ELE-00-002 68 bp View
AR193436.1 emblrelpat Sequence 10 from patent US 6346655. 13737 bp unidentified QT-ELE-00-002 68 bp View
AR212556.1 emblrelpat Sequence 7 from patent US 6399860. 568 bp unidentified QT-ELE-00-002 68 bp View
AR212558.1 emblrelpat Sequence 9 from patent US 6399860. 7378 bp unidentified QT-ELE-00-002 68 bp View
AR342204.1 emblrelpat Sequence 7 from patent US 6573438. 568 bp unidentified QT-ELE-00-002 68 bp View
AR342206.1 emblrelpat Sequence 9 from patent US 6573438. 7378 bp unidentified QT-ELE-00-002 68 bp View
AR371484.1 emblrelpat Sequence 1 from patent US 6395485. 3983 bp unidentified QT-ELE-00-002 68 bp View
AR373962.1 emblrelpat Sequence 8 from patent US 6603062. 4186 bp unidentified QT-ELE-00-002 68 bp View
AR430221.1 emblrelpat Sequence 10 from patent US 6646184. 13737 bp unidentified QT-ELE-00-002 68 bp View
AR723962.1 emblrelpat Sequence 1 from patent US 6951929. 3983 bp unidentified QT-ELE-00-002 68 bp View
AR882131.1 emblrelpat Sequence 10 from patent US 7049421. 13737 bp unidentified QT-ELE-00-002 68 bp View
AX195438.1 emblrelpat Sequence 1 from Patent WO0151654. 3983 bp synthetic construct QT-ELE-00-002 68 bp View
AX683002.1 emblrelpat Sequence 5 from Patent WO03006660. 552 bp synthetic construct QT-ELE-00-002 68 bp View
AX683021.1 emblrelpat Sequence 24 from Patent WO03006660. 8327 bp synthetic construct QT-ELE-00-002 68 bp View
AX683022.1 emblrelpat Sequence 25 from Patent WO03006660. 8441 bp synthetic construct QT-ELE-00-002 68 bp View
AX695990.1 emblrelpat Sequence 2 from Patent WO03008596. 552 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.