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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 2551 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
CS565786.1 emblrelpat Sequence 31 from Patent WO2006032469. 12348 bp synthetic construct QL-ELE-00-026 60 bp View
CS565787.1 emblrelpat Sequence 32 from Patent WO2006032469. 12366 bp synthetic construct QL-ELE-00-026 60 bp View
CS565788.1 emblrelpat Sequence 33 from Patent WO2006032469. 13305 bp synthetic construct QL-ELE-00-026 60 bp View
CS565789.1 emblrelpat Sequence 34 from Patent WO2006032469. 13326 bp synthetic construct QL-ELE-00-026 60 bp View
CS592803.1 emblrelpat Sequence 31 from Patent WO2007039454. 9190 bp synthetic construct QL-ELE-00-026 60 bp View
CS592804.1 emblrelpat Sequence 32 from Patent WO2007039454. 9190 bp synthetic construct QL-ELE-00-026 60 bp View
CS592805.1 emblrelpat Sequence 33 from Patent WO2007039454. 9190 bp synthetic construct QL-ELE-00-026 60 bp View
CS592806.1 emblrelpat Sequence 34 from Patent WO2007039454. 9190 bp synthetic construct QL-ELE-00-026 60 bp View
CS592808.1 emblrelpat Sequence 36 from Patent WO2007039454. 8675 bp synthetic construct QL-ELE-00-026 60 bp View
CS592814.1 emblrelpat Sequence 42 from Patent WO2007039454. 9190 bp synthetic construct QL-ELE-00-026 60 bp View
CS592815.1 emblrelpat Sequence 43 from Patent WO2007039454. 9190 bp synthetic construct QL-ELE-00-026 60 bp View
CS592926.1 emblrelpat Sequence 154 from Patent WO2007039454. 8841 bp synthetic construct QL-ELE-00-026 60 bp View
CS592927.1 emblrelpat Sequence 155 from Patent WO2007039454. 8841 bp synthetic construct QL-ELE-00-026 60 bp View
CS592928.1 emblrelpat Sequence 156 from Patent WO2007039454. 8841 bp synthetic construct QL-ELE-00-026 60 bp View
CS592929.1 emblrelpat Sequence 157 from Patent WO2007039454. 8841 bp synthetic construct QL-ELE-00-026 60 bp View
CS592930.1 emblrelpat Sequence 158 from Patent WO2007039454. 8841 bp synthetic construct QL-ELE-00-026 60 bp View
CS592931.1 emblrelpat Sequence 159 from Patent WO2007039454. 9221 bp synthetic construct QL-ELE-00-026 60 bp View
CS592932.1 emblrelpat Sequence 160 from Patent WO2007039454. 9221 bp synthetic construct QL-ELE-00-026 60 bp View
CS592933.1 emblrelpat Sequence 161 from Patent WO2007039454. 9190 bp synthetic construct QL-ELE-00-026 60 bp View
CS592934.1 emblrelpat Sequence 162 from Patent WO2007039454. 9221 bp synthetic construct QL-ELE-00-026 60 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.