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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 2551 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GN123164 nrnl1 Sequence 6060 from Patent WO2009037... 9010 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN123166 nrnl1 Sequence 6062 from Patent WO2009037... 8674 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN123171 nrnl1 Sequence 6067 from Patent WO2009037... 9137 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN123174 nrnl1 Sequence 6070 from Patent WO2009037... 9303 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN123176 nrnl1 Sequence 6072 from Patent WO2009037... 8975 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN123178 nrnl1 Sequence 6074 from Patent WO2009037... 8588 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN123179 nrnl1 Sequence 6075 from Patent WO2009037... 9007 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN123181 nrnl1 Sequence 6077 from Patent WO2009037... 8678 bp unidentified QL-ELE-00-026 60 bp View
NRN_GX641316 nrnl1 Sequence 31 from patent US 7812223.... 18491 bp unidentified QL-ELE-00-026 60 bp View
NRN_GX711774 nrnl1 Sequence 150 from patent US 7825297... 3736 bp unidentified QL-ELE-00-026 60 bp View
NRN_GZ510880 nrnl1 Sequence 35 from patent US 8269068. 9192 bp unidentified QL-ELE-00-026 60 bp View
NRN_HB477460 nrnl1 Sequence 40 from Patent WO2009086229. 15263 bp unidentified QL-ELE-00-026 60 bp View
NRN_HC001532 nrnl1 Sequence 20 from Patent WO2009106488. 5857 bp unidentified QL-ELE-00-026 60 bp View
NRN_HC001533 nrnl1 Sequence 21 from Patent WO2009106488. 7860 bp unidentified QL-ELE-00-026 60 bp View
NRN_HC918437 nrnl1 Sequence 5 from Patent WO2010061215. 9724 bp unidentified QL-ELE-00-026 60 bp View
NRN_HC918438 nrnl1 Sequence 6 from Patent WO2010061215. 12189 bp unidentified QL-ELE-00-026 60 bp View
NRN_HH760161 nrnl1 Sequence 581 from Patent EP2221381. 11180 bp unidentified QL-ELE-00-026 60 bp View
NRN_HH820950 nrnl1 Sequence 42 from Patent WO2010099462. 1628 bp unidentified QL-ELE-00-026 60 bp View
NRN_HH964262 nrnl1 Sequence 2 from Patent EP1606386. 1911 bp unidentified QL-ELE-00-026 60 bp View
NRN_HH964263 nrnl1 Sequence 3 from Patent EP1606386. 1920 bp unidentified QL-ELE-00-026 60 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.