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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 2551 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_FB719719 nrnl1 Sequence 1194 from Patent WO2007137973. 8585 bp unidentified QL-ELE-00-026 60 bp View
NRN_FB719720 nrnl1 Sequence 1195 from Patent WO2007137973. 8587 bp unidentified QL-ELE-00-026 60 bp View
NRN_FB780729 nrnl1 Sequence 2 from Patent WO2008034648... 8885 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM696869 nrnl1 Sequence 5 from Patent WO2008085605. 9189 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM953047 nrnl1 Sequence 1 from Patent WO2008142034... 9045 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM953048 nrnl1 Sequence 2 from Patent WO2008142034... 8883 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM953049 nrnl1 Sequence 3 from Patent WO2008142034... 9469 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM953051 nrnl1 Sequence 5 from Patent WO2008142034... 9465 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM953061 nrnl1 Sequence 15 from Patent WO200814203... 9044 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM953062 nrnl1 Sequence 16 from Patent WO200814203... 9041 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM961477 nrnl1 Sequence 8431 from Patent WO2008142... 9469 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM961480 nrnl1 Sequence 8434 from Patent WO2008142... 9466 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM961482 nrnl1 Sequence 8436 from Patent WO2008142... 8885 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM961483 nrnl1 Sequence 8437 from Patent WO2008142... 9043 bp unidentified QL-ELE-00-026 60 bp View
NRN_GM998061 nrnl1 Sequence 2 from Patent WO2009002198... 1124 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN079398 nrnl1 Sequence 1 from Patent WO2009027539... 8659 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN081603 nrnl1 Sequence 1 from Patent WO2009029739... 18444 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN081606 nrnl1 Sequence 4 from Patent WO2009029739... 16843 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN123161 nrnl1 Sequence 6057 from Patent WO2009037... 9129 bp unidentified QL-ELE-00-026 60 bp View
NRN_GN123163 nrnl1 Sequence 6059 from Patent WO2009037... 8585 bp unidentified QL-ELE-00-026 60 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.