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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 2551 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_DD123295 nrnl1 Plant Artificial Chromosomes, Uses ... 8428 bp unidentified QL-ELE-00-026 60 bp View
NRN_DD123299 nrnl1 Plant Artificial Chromosomes, Uses ... 12592 bp unidentified QL-ELE-00-026 60 bp View
NRN_DD123313 nrnl1 Plant Artificial Chromosomes, Uses ... 14627 bp unidentified QL-ELE-00-026 60 bp View
NRN_DD351990 nrnl1 A method for optimising gene expres... 549 bp unidentified QL-ELE-00-026 60 bp View
NRN_DI061531 nrnl1 Efficient method for the developmen... 569 bp unidentified QL-ELE-00-026 60 bp View
NRN_DI098239 nrnl1 Transformation vector using maize A... 12811 bp unidentified QL-ELE-00-026 60 bp View
NRN_DI099386 nrnl1 Transformation vector using maize A... 13018 bp unidentified QL-ELE-00-026 60 bp View
NRN_DI123906 nrnl1 Vector for Preparation of Transform... 9458 bp unidentified QL-ELE-00-026 60 bp View
NRN_DJ434698 nrnl1 Cosmid vector for transforming plan... 12884 bp unidentified QL-ELE-00-026 60 bp View
NRN_DJ434699 nrnl1 Cosmid vector for transforming plan... 13026 bp unidentified QL-ELE-00-026 60 bp View
NRN_DJ434700 nrnl1 Cosmid vector for transforming plan... 27875 bp unidentified QL-ELE-00-026 60 bp View
NRN_DM044317 nrnl1 Method for increasing transformatio... 12347 bp unidentified QL-ELE-00-026 60 bp View
NRN_E12512 nrnl1 Bialaphos-resistant gene. Sequence... 552 bp unidentified QL-ELE-00-026 60 bp View
NRN_E31991 nrnl1 Mutated barnase gene and transgenic... 6539 bp unidentified QL-ELE-00-026 60 bp View
NRN_EA059901 nrnl1 Sequence 5 from patent US 7166771. ... 8179 bp unidentified QL-ELE-00-026 60 bp View
NRN_EA059902 nrnl1 Sequence 6 from patent US 7166771. ... 7713 bp unidentified QL-ELE-00-026 60 bp View
NRN_FB702577 nrnl1 Sequence 6 from Patent EP1882742. ... 11465 bp unidentified QL-ELE-00-026 60 bp View
NRN_FB706568 nrnl1 Sequence 7 from Patent WO2007125264... 16177 bp unidentified QL-ELE-00-026 60 bp View
NRN_FB719482 nrnl1 Sequence 957 from Patent WO20071379... 9043 bp unidentified QL-ELE-00-026 60 bp View
NRN_FB719483 nrnl1 Sequence 958 from Patent WO20071379... 9041 bp unidentified QL-ELE-00-026 60 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.