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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 2551 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CS592950 nrnl1 Sequence 178 from Patent WO2007039454. 9221 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592951 nrnl1 Sequence 179 from Patent WO2007039454. 9221 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592952 nrnl1 Sequence 180 from Patent WO2007039454. 9221 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592953 nrnl1 Sequence 181 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592954 nrnl1 Sequence 182 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592955 nrnl1 Sequence 183 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592956 nrnl1 Sequence 184 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592957 nrnl1 Sequence 185 from Patent WO2007039454. 8841 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592961 nrnl1 Sequence 189 from Patent WO2007039454. 9597 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592962 nrnl1 Sequence 190 from Patent WO2007039454. 9597 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592963 nrnl1 Sequence 191 from Patent WO2007039454. 9628 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592964 nrnl1 Sequence 192 from Patent WO2007039454. 9628 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592965 nrnl1 Sequence 193 from Patent WO2007039454. 9597 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592966 nrnl1 Sequence 194 from Patent WO2007039454. 9248 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS722218 nrnl1 Sequence 7 from Patent WO2007096534. 10713 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS722222 nrnl1 Sequence 11 from Patent WO2007096534. 10938 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS811073 nrnl1 Sequence 22 from Patent WO200710729... 5093 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS811248 nrnl1 Sequence 9 from Patent WO2007107516... 10096 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS811251 nrnl1 Sequence 12 from Patent WO200710751... 5246 bp unidentified QL-ELE-00-026 60 bp View
NRN_DD123294 nrnl1 Plant Artificial Chromosomes, Uses ... 11182 bp unidentified QL-ELE-00-026 60 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.