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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 2551 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CS592808 nrnl1 Sequence 36 from Patent WO2007039454. 8675 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592814 nrnl1 Sequence 42 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592815 nrnl1 Sequence 43 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592926 nrnl1 Sequence 154 from Patent WO2007039454. 8841 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592927 nrnl1 Sequence 155 from Patent WO20070394... 8841 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592929 nrnl1 Sequence 157 from Patent WO2007039454. 8841 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592930 nrnl1 Sequence 158 from Patent WO2007039454. 8841 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592931 nrnl1 Sequence 159 from Patent WO2007039454. 9221 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592932 nrnl1 Sequence 160 from Patent WO2007039454. 9221 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592933 nrnl1 Sequence 161 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592934 nrnl1 Sequence 162 from Patent WO20070394... 9221 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592936 nrnl1 Sequence 164 from Patent WO2007039454. 9221 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592940 nrnl1 Sequence 168 from Patent WO2007039454. 9597 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592941 nrnl1 Sequence 169 from Patent WO2007039454. 9597 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592942 nrnl1 Sequence 170 from Patent WO2007039454. 9597 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592943 nrnl1 Sequence 171 from Patent WO2007039454. 9628 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592944 nrnl1 Sequence 172 from Patent WO2007039454. 9628 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592945 nrnl1 Sequence 173 from Patent WO2007039454. 9628 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592946 nrnl1 Sequence 174 from Patent WO2007039454. 8675 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592949 nrnl1 Sequence 177 from Patent WO2007039454. 9221 bp unidentified QL-ELE-00-026 60 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.