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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 2551 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CS437394 nrnl1 Sequence 5 from Patent WO2006105946... 4992 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS479313 nrnl1 Sequence 10 from Patent WO200613635... 3900 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS479314 nrnl1 Sequence 11 from Patent WO200613635... 4680 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS479315 nrnl1 Sequence 12 from Patent WO200613635... 5490 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS479316 nrnl1 Sequence 13 from Patent WO200613635... 5606 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS479317 nrnl1 Sequence 14 from Patent WO200613635... 6464 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565780 nrnl1 Sequence 25 from Patent WO200603246... 11811 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565781 nrnl1 Sequence 26 from Patent WO200603246... 11829 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565782 nrnl1 Sequence 27 from Patent WO200603246... 12393 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565783 nrnl1 Sequence 28 from Patent WO200603246... 12414 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565784 nrnl1 Sequence 29 from Patent WO200603246... 12366 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565785 nrnl1 Sequence 30 from Patent WO200603246... 12384 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565786 nrnl1 Sequence 31 from Patent WO200603246... 12348 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565787 nrnl1 Sequence 32 from Patent WO200603246... 12366 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565788 nrnl1 Sequence 33 from Patent WO200603246... 13305 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS565789 nrnl1 Sequence 34 from Patent WO200603246... 13326 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592803 nrnl1 Sequence 31 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592804 nrnl1 Sequence 32 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592805 nrnl1 Sequence 33 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View
NRN_CS592806 nrnl1 Sequence 34 from Patent WO2007039454. 9190 bp unidentified QL-ELE-00-026 60 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.