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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1558 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI405738.1 emblrelpat KR 1020140063617-A/31: PRODUCTION O... 38794 bp synthetic construct QL-ELE-00-025 108 bp View
DI405739.1 emblrelpat KR 1020140063617-A/32: PRODUCTION O... 39711 bp synthetic construct QL-ELE-00-025 108 bp View
DI405740.1 emblrelpat KR 1020140063617-A/33: PRODUCTION O... 38811 bp synthetic construct QL-ELE-00-025 108 bp View
DI405741.1 emblrelpat KR 1020140063617-A/34: PRODUCTION O... 35302 bp synthetic construct QL-ELE-00-025 108 bp View
DI405742.1 emblrelpat KR 1020140063617-A/35: PRODUCTION O... 35154 bp synthetic construct QL-ELE-00-025 108 bp View
DI405743.1 emblrelpat KR 1020140063617-A/36: PRODUCTION O... 36102 bp synthetic construct QL-ELE-00-025 108 bp View
DI405744.1 emblrelpat KR 1020140063617-A/37: PRODUCTION O... 39183 bp synthetic construct QL-ELE-00-025 108 bp View
DI405745.1 emblrelpat KR 1020140063617-A/38: PRODUCTION O... 38742 bp synthetic construct QL-ELE-00-025 108 bp View
DI405746.1 emblrelpat KR 1020140063617-A/39: PRODUCTION O... 38760 bp synthetic construct QL-ELE-00-025 108 bp View
DI405747.1 emblrelpat KR 1020140063617-A/40: PRODUCTION O... 34862 bp synthetic construct QL-ELE-00-025 108 bp View
DI405748.1 emblrelpat KR 1020140063617-A/41: PRODUCTION O... 34404 bp synthetic construct QL-ELE-00-025 108 bp View
DI405749.1 emblrelpat KR 1020140063617-A/42: PRODUCTION O... 38762 bp synthetic construct QL-ELE-00-025 108 bp View
DI405750.1 emblrelpat KR 1020140063617-A/43: PRODUCTION O... 35836 bp synthetic construct QL-ELE-00-025 108 bp View
DI405751.1 emblrelpat KR 1020140063617-A/44: PRODUCTION O... 47165 bp synthetic construct QL-ELE-00-025 108 bp View
DI405752.1 emblrelpat KR 1020140063617-A/45: PRODUCTION O... 46978 bp synthetic construct QL-ELE-00-025 108 bp View
DI405753.1 emblrelpat KR 1020140063617-A/46: PRODUCTION O... 41726 bp synthetic construct QL-ELE-00-025 108 bp View
DI405754.1 emblrelpat KR 1020140063617-A/47: PRODUCTION O... 36797 bp synthetic construct QL-ELE-00-025 108 bp View
DI405755.1 emblrelpat KR 1020140063617-A/48: PRODUCTION O... 42674 bp synthetic construct QL-ELE-00-025 108 bp View
DI405756.1 emblrelpat KR 1020140063617-A/49: PRODUCTION O... 40406 bp synthetic construct QL-ELE-00-025 108 bp View
DI405757.1 emblrelpat KR 1020140063617-A/50: PRODUCTION O... 39630 bp synthetic construct QL-ELE-00-025 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.