European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1558 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_EA021065 nrnl1 Sequence 24 from patent US 7132291.... 10575 bp unidentified QL-ELE-00-025 108 bp View
NRN_EA021066 nrnl1 Sequence 25 from patent US 7132291.... 10677 bp unidentified QL-ELE-00-025 108 bp View
NRN_EA021067 nrnl1 Sequence 26 from patent US 7132291.... 10603 bp unidentified QL-ELE-00-025 108 bp View
NRN_FW377938 nrnl1 Transgenic plant event detection. ... 140 bp unidentified QL-ELE-00-025 108 bp View
NRN_FZ421805 nrnl1 JP 2010539989-A/1: METHODS FOR TRAN... 8448 bp unidentified QL-ELE-00-025 108 bp View
NRN_FZ421806 nrnl1 JP 2010539989-A/2: METHODS FOR TRAN... 8448 bp unidentified QL-ELE-00-025 108 bp View
NRN_GC674001 nrnl1 Sequence 58 from patent US 7449564. 912 bp unidentified QL-ELE-00-025 108 bp View
NRN_GC674002 nrnl1 Sequence 59 from patent US 7449564. 844 bp unidentified QL-ELE-00-025 108 bp View
NRN_GM680857 nrnl1 Sequence 40 from Patent EP1950311. 141 bp unidentified QL-ELE-00-025 108 bp View
NRN_GY007493 nrnl1 Sequence 3 from patent US 7883850. 10348 bp unidentified QL-ELE-00-025 108 bp View
NRN_GZ510878 nrnl1 Sequence 33 from patent US 8269068. 11205 bp unidentified QL-ELE-00-025 108 bp View
NRN_GZ510878 nrnl1 Sequence 33 from patent US 8269068. 11205 bp unidentified QL-ELE-00-025 108 bp View
NRN_GZ510881 nrnl1 Sequence 36 from patent US 8269068. 11205 bp unidentified QL-ELE-00-025 108 bp View
NRN_GZ510881 nrnl1 Sequence 36 from patent US 8269068. 11205 bp unidentified QL-ELE-00-025 108 bp View
NRN_HV774099 nrnl1 JP 2012511926-A/55: TARGETED INTEGR... 2349 bp unidentified QL-ELE-00-025 108 bp View
NRN_JA216561 nrnl1 Sequence 38 from Patent EP2309843. ... 15162 bp unidentified QL-ELE-00-025 108 bp View
OF066589.1 emblrelpat KR 1020200093076-A/9: MAIZE EVENT M... 14008 bp synthetic construct QL-ELE-00-025 108 bp View
OF066590.1 emblrelpat KR 1020200093076-A/10: MAIZE EVENT ... 16068 bp synthetic construct QL-ELE-00-025 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.