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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1558 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MX927507.1 emblrelpat Sequence 23 from patent US 11053544. 11922 bp unidentified QL-ELE-00-025 108 bp View
MX927508.1 emblrelpat Sequence 24 from patent US 11053544. 7390 bp unidentified QL-ELE-00-025 108 bp View
MX927511.1 emblrelpat Sequence 27 from patent US 11053544. 2830 bp unidentified QL-ELE-00-025 108 bp View
MY148506.1 emblrelpat Sequence 15 from patent US 11046968. 37281 bp unidentified QL-ELE-00-025 108 bp View
MY148507.1 emblrelpat Sequence 16 from patent US 11046968. 33672 bp unidentified QL-ELE-00-025 108 bp View
MY148508.1 emblrelpat Sequence 17 from patent US 11046968. 34011 bp unidentified QL-ELE-00-025 108 bp View
MY148509.1 emblrelpat Sequence 18 from patent US 11046968. 33668 bp unidentified QL-ELE-00-025 108 bp View
MY148510.1 emblrelpat Sequence 19 from patent US 11046968. 35570 bp unidentified QL-ELE-00-025 108 bp View
MY148511.1 emblrelpat Sequence 20 from patent US 11046968. 36453 bp unidentified QL-ELE-00-025 108 bp View
MY148512.1 emblrelpat Sequence 21 from patent US 11046968. 33639 bp unidentified QL-ELE-00-025 108 bp View
MY148513.1 emblrelpat Sequence 22 from patent US 11046968. 35500 bp unidentified QL-ELE-00-025 108 bp View
MY148514.1 emblrelpat Sequence 23 from patent US 11046968. 36498 bp unidentified QL-ELE-00-025 108 bp View
MY148515.1 emblrelpat Sequence 24 from patent US 11046968. 36553 bp unidentified QL-ELE-00-025 108 bp View
MY148516.1 emblrelpat Sequence 25 from patent US 11046968. 36658 bp unidentified QL-ELE-00-025 108 bp View
MY148517.1 emblrelpat Sequence 26 from patent US 11046968. 36494 bp unidentified QL-ELE-00-025 108 bp View
MY148518.1 emblrelpat Sequence 27 from patent US 11046968. 37334 bp unidentified QL-ELE-00-025 108 bp View
MY148519.1 emblrelpat Sequence 28 from patent US 11046968. 37330 bp unidentified QL-ELE-00-025 108 bp View
MY148520.1 emblrelpat Sequence 29 from patent US 11046968. 38465 bp unidentified QL-ELE-00-025 108 bp View
MY148521.1 emblrelpat Sequence 30 from patent US 11046968. 36595 bp unidentified QL-ELE-00-025 108 bp View
MY148522.1 emblrelpat Sequence 31 from patent US 11046968. 36880 bp unidentified QL-ELE-00-025 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.