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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1558 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI350604.1 emblrelpat KR 1020130109974-A/56: PRODUCTION O... 39630 bp synthetic construct QL-ELE-00-025 108 bp View
DI350605.1 emblrelpat KR 1020130109974-A/57: PRODUCTION O... 36936 bp synthetic construct QL-ELE-00-025 108 bp View
DI350606.1 emblrelpat KR 1020130109974-A/58: PRODUCTION O... 36767 bp synthetic construct QL-ELE-00-025 108 bp View
DI350607.1 emblrelpat KR 1020130109974-A/59: PRODUCTION O... 35494 bp synthetic construct QL-ELE-00-025 108 bp View
DI350608.1 emblrelpat KR 1020130109974-A/60: PRODUCTION O... 37935 bp synthetic construct QL-ELE-00-025 108 bp View
DI350609.1 emblrelpat KR 1020130109974-A/61: PRODUCTION O... 38239 bp synthetic construct QL-ELE-00-025 108 bp View
DI350610.1 emblrelpat KR 1020130109974-A/62: PRODUCTION O... 34850 bp synthetic construct QL-ELE-00-025 108 bp View
DI350611.1 emblrelpat KR 1020130109974-A/63: PRODUCTION O... 35154 bp synthetic construct QL-ELE-00-025 108 bp View
DI350612.1 emblrelpat KR 1020130109974-A/64: PRODUCTION O... 38074 bp synthetic construct QL-ELE-00-025 108 bp View
DI350613.1 emblrelpat KR 1020130109974-A/65: PRODUCTION O... 36718 bp synthetic construct QL-ELE-00-025 108 bp View
DI350614.1 emblrelpat KR 1020130109974-A/66: PRODUCTION O... 36517 bp synthetic construct QL-ELE-00-025 108 bp View
DI350615.1 emblrelpat KR 1020130109974-A/67: PRODUCTION O... 36590 bp synthetic construct QL-ELE-00-025 108 bp View
DI350616.1 emblrelpat KR 1020130109974-A/68: PRODUCTION O... 35499 bp synthetic construct QL-ELE-00-025 108 bp View
DI350617.1 emblrelpat KR 1020130109974-A/69: PRODUCTION O... 22042 bp synthetic construct QL-ELE-00-025 108 bp View
DI350618.1 emblrelpat KR 1020130109974-A/70: PRODUCTION O... 23255 bp synthetic construct QL-ELE-00-025 108 bp View
DI356592.1 emblrelpat KR 1020130098282-A/53: LOWERING SAT... 13227 bp synthetic construct QL-ELE-00-025 108 bp View
DI356599.1 emblrelpat KR 1020130098282-A/60: LOWERING SAT... 18713 bp synthetic construct QL-ELE-00-025 108 bp View
DI356600.1 emblrelpat KR 1020130098282-A/61: LOWERING SAT... 14524 bp synthetic construct QL-ELE-00-025 108 bp View
DI356601.1 emblrelpat KR 1020130098282-A/62: LOWERING SAT... 18422 bp synthetic construct QL-ELE-00-025 108 bp View
DI356602.1 emblrelpat KR 1020130098282-A/63: LOWERING SAT... 14233 bp synthetic construct QL-ELE-00-025 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.