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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1558 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DD459040.1 emblrelpat Corn Event TC1507 and Methods for D... 3347 bp synthetic construct QL-ELE-00-025 108 bp View
DD459047.1 emblrelpat Corn Event TC1507 and Methods for D... 201 bp synthetic construct QL-ELE-00-025 108 bp View
DD459054.1 emblrelpat Corn Event TC1507 and Methods for D... 188 bp synthetic construct QL-ELE-00-025 108 bp View
DI000194.1 emblrelpat GNTIII expression in plants. 11643 bp unidentified QL-ELE-00-025 108 bp View
DI000700.1 emblrelpat GNTIII expression in plants. 7545 bp unidentified QL-ELE-00-025 108 bp View
DI013921.1 emblrelpat Expression of a Multigene RNA with ... 564 bp unidentified QL-ELE-00-025 108 bp View
DI089632.1 emblrelpat Transgenic plant resistant to mycot... 13737 bp unidentified QL-ELE-00-025 108 bp View
DI124435.1 emblrelpat Vectors and Cells for Preparing Imm... 10575 bp unidentified QL-ELE-00-025 108 bp View
DI125256.1 emblrelpat Vectors and Cells for Preparing Imm... 10677 bp unidentified QL-ELE-00-025 108 bp View
DI125909.1 emblrelpat Vectors and Cells for Preparing Imm... 4767 bp unidentified QL-ELE-00-025 108 bp View
DI139267.1 emblrelpat Vectors and Cells for Preparing Imm... 10603 bp unidentified QL-ELE-00-025 108 bp View
DI231698.1 emblrelpat KR 1020110095420-A/116: Targeted in... 2349 bp artificial sequences QL-ELE-00-025 108 bp View
DI244155.1 emblrelpat KR 1020120107479-A/11: HERBICIDE TO... 4076 bp artificial sequences QL-ELE-00-025 108 bp View
DI244167.1 emblrelpat KR 1020120107974-A/1: DETECTION OF ... 10212 bp artificial sequences QL-ELE-00-025 108 bp View
DI244174.1 emblrelpat KR 1020120102719-A/1: AAD-12 EVENT ... 10212 bp artificial sequences QL-ELE-00-025 108 bp View
DI244973.1 emblrelpat KR 1020120107998-A/1: ENDPOINT TAQM... 2829 bp artificial sequences QL-ELE-00-025 108 bp View
DI244974.1 emblrelpat KR 1020120107998-A/2: ENDPOINT TAQM... 2346 bp artificial sequences QL-ELE-00-025 108 bp View
DI244975.1 emblrelpat KR 1020120107998-A/3: ENDPOINT TAQM... 11361 bp artificial sequences QL-ELE-00-025 108 bp View
DI244975.1 emblrelpat KR 1020120107998-A/3: ENDPOINT TAQM... 11361 bp artificial sequences QL-ELE-00-025 108 bp View
DI244975.1 emblrelpat KR 1020120107998-A/3: ENDPOINT TAQM... 11361 bp artificial sequences QL-ELE-00-025 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.