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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1558 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
BD105559.1 emblrelpat Method of constructing transgenic p... 4186 bp unidentified QL-ELE-00-025 108 bp View
BD194459.1 emblrelpat JP 2002509710-A/8: Chimeric insecti... 5465 bp synthetic construct QL-ELE-00-025 108 bp View
BD247867.1 emblrelpat JP 2002540787-A/7: Transgenic plant... 13737 bp synthetic construct QL-ELE-00-025 108 bp View
BD378188.1 emblrelpat Methods and kits for identifying e... 3983 bp synthetic construct QL-ELE-00-025 108 bp View
CQ924483.1 emblrelpat Sequence 10 from Patent EP1477557. 13737 bp synthetic construct QL-ELE-00-025 108 bp View
CQ945859.1 emblrelpat Sequence 21 from Patent WO2004099447. 2829 bp unidentified QL-ELE-00-025 108 bp View
CQ945860.1 emblrelpat Sequence 22 from Patent WO2004099447. 2346 bp unidentified QL-ELE-00-025 108 bp View
CQ945862.1 emblrelpat Sequence 24 from Patent WO2004099447. 11361 bp synthetic construct QL-ELE-00-025 108 bp View
CQ945862.1 emblrelpat Sequence 24 from Patent WO2004099447. 11361 bp synthetic construct QL-ELE-00-025 108 bp View
CQ945862.1 emblrelpat Sequence 24 from Patent WO2004099447. 11361 bp synthetic construct QL-ELE-00-025 108 bp View
CQ945863.1 emblrelpat Sequence 25 from Patent WO2004099447. 6186 bp synthetic construct QL-ELE-00-025 108 bp View
CQ945864.1 emblrelpat Sequence 26 from Patent WO2004099447. 3830 bp synthetic construct QL-ELE-00-025 108 bp View
CQ945865.1 emblrelpat Sequence 27 from Patent WO2004099447. 3347 bp synthetic construct QL-ELE-00-025 108 bp View
CQ945865.1 emblrelpat Sequence 27 from Patent WO2004099447. 3347 bp synthetic construct QL-ELE-00-025 108 bp View
CQ945872.1 emblrelpat Sequence 34 from Patent WO2004099447. 201 bp synthetic construct QL-ELE-00-025 108 bp View
CQ945879.1 emblrelpat Sequence 41 from Patent WO2004099447. 188 bp synthetic construct QL-ELE-00-025 108 bp View
CS007935.1 emblrelpat Sequence 2 from Patent EP1502955. 11195 bp synthetic construct QL-ELE-00-025 108 bp View
CS007936.1 emblrelpat Sequence 3 from Patent EP1502955. 12415 bp synthetic construct QL-ELE-00-025 108 bp View
CS025574.1 emblrelpat Sequence 2 from Patent WO2005014827. 11195 bp synthetic construct QL-ELE-00-025 108 bp View
CS025575.1 emblrelpat Sequence 3 from Patent WO2005014827. 12415 bp synthetic construct QL-ELE-00-025 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.