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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1558 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI405758.1 emblrelpat KR 1020140063617-A/51: PRODUCTION O... 36936 bp synthetic construct QL-ELE-00-025 108 bp View
DI405759.1 emblrelpat KR 1020140063617-A/52: PRODUCTION O... 36767 bp synthetic construct QL-ELE-00-025 108 bp View
DI405760.1 emblrelpat KR 1020140063617-A/53: PRODUCTION O... 35494 bp synthetic construct QL-ELE-00-025 108 bp View
DI405761.1 emblrelpat KR 1020140063617-A/54: PRODUCTION O... 37935 bp synthetic construct QL-ELE-00-025 108 bp View
DI405762.1 emblrelpat KR 1020140063617-A/55: PRODUCTION O... 38239 bp synthetic construct QL-ELE-00-025 108 bp View
DI405763.1 emblrelpat KR 1020140063617-A/56: PRODUCTION O... 34850 bp synthetic construct QL-ELE-00-025 108 bp View
DI405764.1 emblrelpat KR 1020140063617-A/57: PRODUCTION O... 35154 bp synthetic construct QL-ELE-00-025 108 bp View
DI405765.1 emblrelpat KR 1020140063617-A/58: PRODUCTION O... 38074 bp synthetic construct QL-ELE-00-025 108 bp View
DI405766.1 emblrelpat KR 1020140063617-A/59: PRODUCTION O... 36718 bp synthetic construct QL-ELE-00-025 108 bp View
DI405767.1 emblrelpat KR 1020140063617-A/60: PRODUCTION O... 36517 bp synthetic construct QL-ELE-00-025 108 bp View
DI405768.1 emblrelpat KR 1020140063617-A/61: PRODUCTION O... 36590 bp synthetic construct QL-ELE-00-025 108 bp View
DI405769.1 emblrelpat KR 1020140063617-A/62: PRODUCTION O... 35499 bp synthetic construct QL-ELE-00-025 108 bp View
DI405770.1 emblrelpat KR 1020140063617-A/63: PRODUCTION O... 22042 bp synthetic construct QL-ELE-00-025 108 bp View
DI405771.1 emblrelpat KR 1020140063617-A/64: PRODUCTION O... 23255 bp synthetic construct QL-ELE-00-025 108 bp View
DI406344.1 emblrelpat KR 1020140051362-A/3: INSECT RESIST... 12381 bp synthetic construct QL-ELE-00-025 108 bp View
DI406355.1 emblrelpat KR 1020140051362-A/14: INSECT RESIS... 15294 bp synthetic construct QL-ELE-00-025 108 bp View
DI406356.1 emblrelpat KR 1020140051362-A/15: INSECT RESIS... 10212 bp synthetic construct QL-ELE-00-025 108 bp View
DI406400.1 emblrelpat KR 1020140050079-A/3: INSECT RESIST... 12381 bp synthetic construct QL-ELE-00-025 108 bp View
DI406411.1 emblrelpat KR 1020140050079-A/14: INSECT RESIS... 15294 bp synthetic construct QL-ELE-00-025 108 bp View
DI406414.1 emblrelpat KR 1020140057288-A/3: SOYBEAN EVENT... 12381 bp synthetic construct QL-ELE-00-025 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.