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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI360506.1 emblrelpat KR 1020130028984-A/327: Plants with... 4175 bp synthetic construct QL-ELE-00-024 87 bp View
DI399546.1 emblrelpat KR 1020140039224-A/203: PLANT REGUL... 633 bp Pisum sativum QL-ELE-00-024 87 bp View
DJ069613.1 emblrelpat Plants having modified growth chara... 3048 bp synthetic construct QL-ELE-00-024 87 bp View
DJ329089.1 emblrelpat ISOFORMS OF EIF-5A:SENESCENCE-INDUC... 662 bp synthetic construct QL-ELE-00-024 87 bp View
DJ329110.1 emblrelpat ISOFORMS OF EIF-5A:SENESCENCE-INDUC... 662 bp synthetic construct QL-ELE-00-024 87 bp View
DJ329115.1 emblrelpat ISOFORMS OF EIF-5A:SENESCENCE-INDUC... 662 bp synthetic construct QL-ELE-00-024 87 bp View
DJ329119.1 emblrelpat ISOFORMS OF EIF-5A:SENESCENCE-INDUC... 662 bp synthetic construct QL-ELE-00-024 87 bp View
DJ329123.1 emblrelpat ISOFORMS OF EIF-5A:SENESCENCE-INDUC... 662 bp synthetic construct QL-ELE-00-024 88 bp View
DJ329128.1 emblrelpat ISOFORMS OF EIF-5A:SENESCENCE-INDUC... 662 bp synthetic construct QL-ELE-00-024 87 bp View
DJ329133.1 emblrelpat ISOFORMS OF EIF-5A:SENESCENCE-INDUC... 662 bp synthetic construct QL-ELE-00-024 87 bp View
DJ439793.1 emblrelpat Plants having improved growth chara... 3560 bp synthetic construct QL-ELE-00-024 87 bp View
DL469839.1 emblrelpat REPRODUCTIVE ABLATION CONSTRUCTS. 10312 bp synthetic construct QL-ELE-00-024 87 bp View
DL469840.1 emblrelpat REPRODUCTIVE ABLATION CONSTRUCTS. 10312 bp synthetic construct QL-ELE-00-024 87 bp View
DM001984.1 emblrelpat METHODS OF INCREASING SEED YIELD. 662 bp synthetic construct QL-ELE-00-024 87 bp View
DM002005.1 emblrelpat METHODS OF INCREASING SEED YIELD. 662 bp synthetic construct QL-ELE-00-024 87 bp View
DM002010.1 emblrelpat METHODS OF INCREASING SEED YIELD. 662 bp synthetic construct QL-ELE-00-024 87 bp View
DM002014.1 emblrelpat METHODS OF INCREASING SEED YIELD. 662 bp synthetic construct QL-ELE-00-024 87 bp View
DM002018.1 emblrelpat METHODS OF INCREASING SEED YIELD. 662 bp synthetic construct QL-ELE-00-024 88 bp View
DM002023.1 emblrelpat METHODS OF INCREASING SEED YIELD. 662 bp synthetic construct QL-ELE-00-024 87 bp View
DM002028.1 emblrelpat METHODS OF INCREASING SEED YIELD. 662 bp synthetic construct QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.