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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_HC307896 nrnl1 Sequence 137 from Patent WO2010000708. 15441 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC473398 nrnl1 Sequence 5 from Patent WO2010024976. 3036 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC473399 nrnl1 Sequence 6 from Patent WO2010024976. 5087 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC473400 nrnl1 Sequence 7 from Patent WO2010024976. 3549 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC474755 nrnl1 Sequence 71 from Patent WO201002320... 28875 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC474755 nrnl1 Sequence 71 from Patent WO201002320... 28875 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC474767 nrnl1 Sequence 83 from Patent WO201002320... 558 bp unidentified QL-ELE-00-024 87 bp View
NRN_HC510453 nrnl1 Sequence 43 from Patent WO2010036946. 643 bp unidentified QL-ELE-00-024 87 bp View
NRN_HI284312 nrnl1 Sequence 169 from Patent EP2046111. 4856 bp unidentified QL-ELE-00-024 87 bp View
NRN_HI284313 nrnl1 Sequence 170 from Patent EP2046111. 1394 bp unidentified QL-ELE-00-024 87 bp View
NRN_HI929484 nrnl1 Sequence 16 from Patent WO200913029... 24356 bp unidentified QL-ELE-00-024 87 bp View
NRN_HI929485 nrnl1 Sequence 17 from Patent WO200913029... 23990 bp unidentified QL-ELE-00-024 87 bp View
NRN_HI968058 nrnl1 Sequence 9 from Patent WO2010138011. 8172 bp unidentified QL-ELE-00-024 87 bp View
NRN_HI968060 nrnl1 Sequence 11 from Patent WO2010138011. 7942 bp unidentified QL-ELE-00-024 87 bp View
NRN_HI968062 nrnl1 Sequence 13 from Patent WO2010138011. 8906 bp unidentified QL-ELE-00-024 87 bp View
NRN_HV699110 nrnl1 JP 2012503989-A/5: SOYBEAN TRANSGEN... 7251 bp unidentified QL-ELE-00-024 87 bp View
NRN_HV699111 nrnl1 JP 2012503989-A/6: SOYBEAN TRANSGEN... 13224 bp unidentified QL-ELE-00-024 87 bp View
NRN_HV699112 nrnl1 JP 2012503989-A/7: SOYBEAN TRANSGEN... 6583 bp unidentified QL-ELE-00-024 87 bp View
NRN_JA078178 nrnl1 Sequence 2 from Patent WO2011034946... 20500 bp unidentified QL-ELE-00-024 87 bp View
NRN_JA078178 nrnl1 Sequence 2 from Patent WO2011034946... 20500 bp unidentified QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.