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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CS401504 nrnl1 Sequence 1 from Patent WO2006013072... 12287 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS401504 nrnl1 Sequence 1 from Patent WO2006013072... 12287 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS401505 nrnl1 Sequence 2 from Patent WO2006013072... 12261 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS401505 nrnl1 Sequence 2 from Patent WO2006013072... 12261 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS401506 nrnl1 Sequence 3 from Patent WO2006013072... 6256 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS401507 nrnl1 Sequence 4 from Patent WO2006013072... 6230 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS401508 nrnl1 Sequence 5 from Patent WO2006013072... 11614 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS401509 nrnl1 Sequence 6 from Patent WO2006013072... 11588 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS401512 nrnl1 Sequence 9 from Patent WO2006013072... 5047 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS401582 nrnl1 Sequence 79 from Patent WO200601307... 11152 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS415723 nrnl1 Sequence 4 from Patent WO2006045829. 4308 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS421031 nrnl1 Sequence 2 from Patent WO2006099249... 7794 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS539255 nrnl1 Sequence 67 from Patent WO200603370... 3523 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS539255 nrnl1 Sequence 67 from Patent WO200603370... 3523 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS539256 nrnl1 Sequence 68 from Patent WO200603370... 3158 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS540635 nrnl1 Sequence 14 from Patent WO200701257... 670 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS630761 nrnl1 Sequence 5 from Patent WO2006058897... 2709 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS804764 nrnl1 Sequence 101 from Patent WO20070441... 7129 bp unidentified QL-ELE-00-024 87 bp View
NRN_DD070085 nrnl1 Materials and Methods for Producing... 1998 bp unidentified QL-ELE-00-024 87 bp View
NRN_DD139996 nrnl1 BIOLUMINESCENT PLANTS AND METHODS O... 12497 bp unidentified QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.