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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
DD139997.1 emblrelpat BIOLUMINESCENT PLANTS AND METHODS O... 12304 bp synthetic construct QL-ELE-00-024 87 bp View
DD229857.1 emblrelpat NOVEL IMMUNOADHESINS FOR TREATING A... 7129 bp unidentified QL-ELE-00-024 87 bp View
DD417674.1 emblrelpat Glyphosate Tolerant Sugar Beet. 3778 bp synthetic construct QL-ELE-00-024 87 bp View
DD417675.1 emblrelpat Glyphosate Tolerant Sugar Beet. 3706 bp synthetic construct QL-ELE-00-024 87 bp View
DI119995.1 emblrelpat ISOFORMS OF EIF-5A: SENESCENCE-INDU... 662 bp unidentified QL-ELE-00-024 88 bp View
DI120149.1 emblrelpat ISOFORMS OF EIF-5A: SENESCENCE-INDU... 662 bp unidentified QL-ELE-00-024 87 bp View
DI120532.1 emblrelpat ISOFORMS OF EIF-5A: SENESCENCE-INDU... 662 bp unidentified QL-ELE-00-024 87 bp View
DI121161.1 emblrelpat ISOFORMS OF EIF-5A: SENESCENCE-INDU... 662 bp unidentified QL-ELE-00-024 87 bp View
DI121286.1 emblrelpat ISOFORMS OF EIF-5A: SENESCENCE-INDU... 662 bp unidentified QL-ELE-00-024 87 bp View
DI121361.1 emblrelpat ISOFORMS OF EIF-5A: SENESCENCE-INDU... 662 bp unidentified QL-ELE-00-024 87 bp View
DI121522.1 emblrelpat ISOFORMS OF EIF-5A: SENESCENCE-INDU... 662 bp unidentified QL-ELE-00-024 87 bp View
DI211829.1 emblrelpat KR 1020100112658-A/5: SOYBEAN PLANT... 7367 bp artificial sequences QL-ELE-00-024 87 bp View
DI211830.1 emblrelpat KR 1020100112658-A/6: SOYBEAN PLANT... 9294 bp artificial sequences QL-ELE-00-024 87 bp View
DI211831.1 emblrelpat KR 1020100112658-A/7: SOYBEAN PLANT... 7849 bp artificial sequences QL-ELE-00-024 87 bp View
DI227398.1 emblrelpat KR 1020110063817-A/5: SOYBEAN TRANS... 7251 bp artificial sequences QL-ELE-00-024 87 bp View
DI227399.1 emblrelpat KR 1020110063817-A/6: SOYBEAN TRANS... 13224 bp artificial sequences QL-ELE-00-024 87 bp View
DI227400.1 emblrelpat KR 1020110063817-A/7: SOYBEAN TRANS... 6583 bp artificial sequences QL-ELE-00-024 87 bp View
DI241795.1 emblrelpat KR 1020120081150-A/5: SOYBEAN TRANS... 3003 bp artificial sequences QL-ELE-00-024 87 bp View
DI241796.1 emblrelpat KR 1020120081150-A/6: SOYBEAN TRANS... 5946 bp artificial sequences QL-ELE-00-024 87 bp View
DI354020.1 emblrelpat KR 1020130086599-A/5: TRANSGENIC BR... 4427 bp synthetic construct QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.