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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_AX052539 nrnl1 Sequence 1 from Patent WO0071668. 12614 bp unidentified QL-ELE-00-024 87 bp View
NRN_AX463287 nrnl1 Sequence 7 from Patent WO0250295. ... 632 bp unidentified QL-ELE-00-024 87 bp View
NRN_BD062173 nrnl1 Expression of fructose 1,6 bisphosp... 10847 bp unidentified QL-ELE-00-024 87 bp View
NRN_BD062174 nrnl1 Expression of fructose 1,6 bisphosp... 10901 bp unidentified QL-ELE-00-024 87 bp View
NRN_CQ867566 nrnl1 Sequence 5 from Patent WO2004074492... 3778 bp unidentified QL-ELE-00-024 87 bp View
NRN_CQ867567 nrnl1 Sequence 6 from Patent WO2004074492... 3706 bp unidentified QL-ELE-00-024 87 bp View
NRN_CQ892398 nrnl1 Sequence 3 from Patent WO2004087927... 2538 bp unidentified QL-ELE-00-024 87 bp View
NRN_CQ895917 nrnl1 Sequence 7 from Patent WO2004090142. 3032 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS029016 nrnl1 Sequence 89 from Patent WO200411352... 662 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS029072 nrnl1 Sequence 145 from Patent WO20041135... 662 bp unidentified QL-ELE-00-024 88 bp View
NRN_CS106598 nrnl1 Sequence 13 from Patent WO200504964... 3074 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS133151 nrnl1 Sequence 5 from Patent WO2005059147... 3048 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS180351 nrnl1 Sequence 3 from Patent WO2005094562... 3560 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS204337 nrnl1 Sequence 45 from Patent WO2005108568. 6323 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS204343 nrnl1 Sequence 51 from Patent WO2005108568. 15506 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS240018 nrnl1 Sequence 8 from Patent WO2005117568... 3077 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS250102 nrnl1 Sequence 41 from Patent WO200512392... 3328 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS250104 nrnl1 Sequence 43 from Patent WO200512392... 2746 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS353195 nrnl1 Sequence 44 from Patent WO200606920... 4276 bp unidentified QL-ELE-00-024 87 bp View
NRN_CS353195 nrnl1 Sequence 44 from Patent WO200606920... 4276 bp unidentified QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.