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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MV844287.1 emblrelpat Sequence 298 from patent US 10829775. 45777 bp unidentified QL-ELE-00-024 87 bp View
MV844288.1 emblrelpat Sequence 299 from patent US 10829775. 43720 bp unidentified QL-ELE-00-024 87 bp View
MV844296.1 emblrelpat Sequence 307 from patent US 10829775. 39620 bp unidentified QL-ELE-00-024 87 bp View
MV844297.1 emblrelpat Sequence 308 from patent US 10829775. 37487 bp unidentified QL-ELE-00-024 87 bp View
MW026669.1 nt Plant expression vector pZG159, com... 12406 bp Plant expression vector pZG159 QL-ELE-00-024 87 bp View
MW026670.1 nt Plant expression vector pZG160, com... 12388 bp Plant expression vector pZG160 QL-ELE-00-024 87 bp View
MW026671.1 nt Plant expression vector pZG161, com... 13607 bp Plant expression vector pZG161 QL-ELE-00-024 87 bp View
MW026672.1 nt Plant expression vector pZG162, com... 12850 bp Plant expression vector pZG162 QL-ELE-00-024 87 bp View
MW026673.1 nt Plant expression vector pZG163, com... 12832 bp Plant expression vector pZG163 QL-ELE-00-024 87 bp View
MW026674.1 nt Plant expression vector pZG164, com... 14050 bp Plant expression vector pZG164 QL-ELE-00-024 87 bp View
MW026675.1 nt Plant expression vector pZG51, comp... 11799 bp Plant expression vector pZG51 QL-ELE-00-024 87 bp View
MW026676.1 nt Plant expression vector pZG56, comp... 12332 bp Plant expression vector pZG56 QL-ELE-00-024 87 bp View
MW026677.1 nt Plant expression vector pZG61, comp... 13439 bp Plant expression vector pZG61 QL-ELE-00-024 87 bp View
MW026678.1 nt Plant expression vector pZG66, comp... 13025 bp Plant expression vector pZG66 QL-ELE-00-024 87 bp View
MW026679.1 nt Plant expression vector pZG71, comp... 13558 bp Plant expression vector pZG71 QL-ELE-00-024 87 bp View
MW026680.1 nt Plant expression vector pZG165, com... 12906 bp Plant expression vector pZG165 QL-ELE-00-024 87 bp View
MW557526.1 nt Cloning vector pGWB-nLUC, complete ... 13430 bp Cloning vector pGWB-nLUC QL-ELE-00-024 87 bp View
MW557527.1 nt Cloning vector pGWB-cLUC, complete ... 12656 bp Cloning vector pGWB-cLUC QL-ELE-00-024 87 bp View
MX500627.1 emblrelpat Sequence 14 from patent US 10954528. 643 bp unidentified QL-ELE-00-024 87 bp View
MY046637.1 emblrelpat Sequence 1 from patent US 11033593. 60074 bp unidentified QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.