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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1055 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MV836389.1 emblrelpat Sequence 14 from patent US 10822612. 14133 bp unidentified QL-ELE-00-024 87 bp View
MV836391.1 emblrelpat Sequence 17 from patent US 10822612. 14133 bp unidentified QL-ELE-00-024 87 bp View
MV836393.1 emblrelpat Sequence 20 from patent US 10822612. 14072 bp unidentified QL-ELE-00-024 87 bp View
MV836395.1 emblrelpat Sequence 23 from patent US 10822612. 14072 bp unidentified QL-ELE-00-024 87 bp View
MV836397.1 emblrelpat Sequence 26 from patent US 10822612. 14949 bp unidentified QL-ELE-00-024 87 bp View
MV836399.1 emblrelpat Sequence 29 from patent US 10822612. 12346 bp unidentified QL-ELE-00-024 87 bp View
MV836401.1 emblrelpat Sequence 32 from patent US 10822612. 12286 bp unidentified QL-ELE-00-024 87 bp View
MV836403.1 emblrelpat Sequence 35 from patent US 10822612. 12244 bp unidentified QL-ELE-00-024 87 bp View
MV836405.1 emblrelpat Sequence 38 from patent US 10822612. 12304 bp unidentified QL-ELE-00-024 87 bp View
MV844001.1 emblrelpat Sequence 1 from patent US 10829775. 60097 bp unidentified QL-ELE-00-024 87 bp View
MV844002.1 emblrelpat Sequence 2 from patent US 10829775. 61102 bp unidentified QL-ELE-00-024 87 bp View
MV844003.1 emblrelpat Sequence 3 from patent US 10829775. 60074 bp unidentified QL-ELE-00-024 87 bp View
MV844004.1 emblrelpat Sequence 4 from patent US 10829775. 61092 bp unidentified QL-ELE-00-024 87 bp View
MV844005.1 emblrelpat Sequence 5 from patent US 10829775. 26802 bp unidentified QL-ELE-00-024 87 bp View
MV844006.1 emblrelpat Sequence 6 from patent US 10829775. 30687 bp unidentified QL-ELE-00-024 87 bp View
MV844268.1 emblrelpat Sequence 279 from patent US 10829775. 60074 bp unidentified QL-ELE-00-024 87 bp View
MV844269.1 emblrelpat Sequence 280 from patent US 10829775. 44910 bp unidentified QL-ELE-00-024 87 bp View
MV844270.1 emblrelpat Sequence 281 from patent US 10829775. 43757 bp unidentified QL-ELE-00-024 87 bp View
MV844278.1 emblrelpat Sequence 289 from patent US 10829775. 47800 bp unidentified QL-ELE-00-024 87 bp View
MV844279.1 emblrelpat Sequence 290 from patent US 10829775. 43773 bp unidentified QL-ELE-00-024 87 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.